Organization

Start Date

End Date

Designation

Nature of Work

23^rd Dec 2024

Name of the Student

Topic

Year of Award

Co-Supervisor (if any)

Ms AnubhaDubey

“Machine Learning Models for Analysis of Molecular Sequences of HIV”

March 2014

Mrs. SwetaRamole

“In-Silico Saturation Mapping of the QTL Region Associated with Root Traits Imparting Drought Tolerance in Rice”

Jan 2014

Ms Laxmi Pillai

“Computational Analysis of Molecular Sequences of Tuberculosis”

Aug 2014

Mr. Ashok  Dwivedi

“Soft Computing Approaches for Modeling Reticulate Evolution in Molecular Sequences”

Sep 2014

Mrs.Priyanka Solanki

“ Computational Model for Mining Association Rules in Molecular Sequences of Flavivirus”

Jan 2016

Mrs. SoumyaDhawan

In-silico analysis of molecular sequences of parkinson’s disease for bioprospecting

Mar 2017

Ms Mona Dwivedi

Study of Thermal Variation in Sublayers of Human Skin Using Mathematical Approach

Aug 2018

Mrs. NishaSinghal

Study of Some Hybrid Structures of Soft Set with a Novel Aggregation Operator and their Application Perspective

Nov 2018

Sunil Kumar Suryawanshi

Computational Approaches for Prediction of Bioactive Peptides from Medicinal Plants

June 2019

Ms. Neha Verma

Pharmaciinformatics studies on PPAR agonists for therapeutic applications in diabetes mmellitus

Jan 2020

Ms. Sapna Singh Yadav

System level network analysis of molecular interactions in genetic disorders

Jan 2020

Ms. Rachna Soni

Mathematical models to study the dynamic prey-predator system

Sep 2020

Mr. Sonu Kurmi

Multicompartment Mathematical Models for Analysis and Prediction of Coronavirus Disease

2019 (July) –Joining Date

Ms. Shaifali  Bhatt

Computational Models  and Ecosystems

2020 (Dec) –Joining Date

Mr. Abhinav Gupta

Mathematics Modelling in population dynamics

2022 (July) –Joining Date

Title

Sponsoring Agency

Duration

Amount

Co-PI (if any)

Computational Approach to Study Complex Biological Network of Diseases using Molecular Data

MPCST Bhopal

2016-2018

5 Lakhs (Aprox.)

Mathematical Models to Study Phylogenetic Networks of Nucleotide & Peptide Sequences

MANIT Sponsored by MHRD

2010-2015

15,00000

Title

Sponsoring Agency

Duration

Amount

Co-Investigator                       (if any)

Authors

Title

VOL. NO.,

PAGE NO

YEAR

SCI/

Scopus

IMPACT FACTOR

Usha Chouhan, K.R.Pardasani

A linear programming approach to study phylogenetic networks in honeybee,

OJB an International Journal

Vo.l.No.11(1):72-82,2010

2010

Google Scholar

7.40

Usha Chouhan, K.R.Pardasani

A Maximum Parsimony Model to Reconstruct Phylogenetic Network in Honey Bee Evolution

International Journal of Biological, Biomolecular, Agricultural, Food and Biotechnological Engineering

Vol:1, No:10, 2007

pg129-133

2007

Google Scholar

Usha Chouhan, K.R.Pardasani

A Computational Model to Study Phylogenetic Relationships Under Reticulate (Nested) Evolution

R H An International   Multi   Disciplinary Journal

Vol.-III,Issue-II,March-June,2008,pg 65-68.

2008

Google Scholar

Usha Chouhan, K.R.Pardasani

A Fuzzy Clustering Based Phylogenetic Model to Detect Recombination Network in Hiv-1

Impact J. Of Science & Technology , an International Journal

Vol.4,No.43,43-55,2010

2010

Google Scholar

1.002

Usha Chouhan, K.R.Pardasani

A Computational Model to Study Horizontal Gene Transfers in Serially Sampled HIV Quasispecies

South East Asia Journal of Mathematics &mathematical sciences

Vol.8,No.3(2010),pg.63-70.

2010

Google Scholar

SwetaRamole,

Usha Chouhan

In silico analysis of rice and Arabidopsis spp. PIP genes.

Online Journal Of Bioinformatics,13,1,2012

Vol.13,1,2012

2012

Google Scholar

7.40

SwetaRamole,

Usha Chouhan

In silico Classification of EST Sequences of Stevia

rebaudianaBertoni based on SSR Length Variations

International Journal of Horticultural & Crop Science Research

Volume 2, Number 1(2012)

2012

Google Scholar

AnubhaDubey,

Usha Chouhan

Machine learning models to classify HIV membrane and soluble proteins

Online Journal of Bioinformatics

vol 13 (2) 2012

2012

Google Scholar

7.40

AnubhaDubey,

Usha Chouhan

Support Vector Machine For Classification of HIV,PLANT AND ANIMAL miRNA’S

International Journal of Bioinformatics Research

Vol. 3, Issue 2, 2011, pp-202-206

2011

Google Scholar

 ICV : 7.10

AnubhaDubey,

Dr.Usha Chouhan

Biochemical  Parameters based Structural  Classification of HIV Proteins

International Journal of Biometrics and Bioinformatics

Vol 3, No.9 September 2011

2011

Google Scholar

AnubhaDubey,

Kumud Pant,

Usha Chouhan

Machine Learning Simulation Model for Prediction and Classification of Sub cellular Localization of HIV apoptosis Proteins by Amino acid Composition

Journal of Computational Intelligence in Bioinformatics

Vol .5, No. 2 (2012)

2012

Google Scholar

Anubha Dubey,

Usha Chouhan

Computational Model for Prediction of Transmembrane Helices in HIV

International Journal of Engineering Research & Applications,

Vol 2 ,Issue 2, Mar –April 2012

2012

Google Scholar

Anubha Dubey, Bhaskar Pant, Usha Chouhan

Machine learning model for HIV1 and HIV2 enzyme secondary

structure classification

J. Comput. Method. Mol. Design

2011, 1 (2)

2011

Google Scholar

Anubha Dubey,

Usha Chouhan

A Computational Approach to Classify HIV Secondary Structure Of Enzymes

The Internet Journal of Medical Informatics

VoL 5(2). DOI: 10.5580/5b1,2011

2011

Google Scholar

Anubha Dubey, Bhaskar Pant, Usha Chouhan

SVM Model for Classification of Structural and Regulatory proteins of HIV1 & HIV2

Journal of Advanced Bioinformatics Applications and Research

Vol 2, Issue 1, 2011, pp 84-88

2011

Google Scholar

AnubhaDubey,

Kumud Pant,

Usha Chouhan

SVM based Evolutionary Model for Classification of Bacteria, Fungi, Animal and HIV GPCR’S

Journal of Advanced Bioinformatics Applications and Research

Vol 2, Issue 2, June-2011, pp 125-129

2011

Google Scholar

AnubhaDubey,

Kumud Pant,

Usha Chouhan

SVM based Hybrid Approach to Classify HIV1 and HIV2 on the Basis of Amino Acid Composition and Dipeptide Composition

Bioinformatics Trends

Vol.6 Issue-1&2, 2011

2011

Google Scholar

AnubhaDubey, Usha Chouhan

Subcellular Localization of Proteins

Archives of Applied Science Research

2011, 3 (6):392-401

2011

Google Scholar

Lakshmi Pillai , Bhasker Pant,  Ushachauhan,  K. R. Pardasani

SVM Model for Amino Acid Composition Based Prediction of Mycobacterium Tuberculosis

B IO M I R ROR

Volume 2(6) :1-4(May 2011)

2011

Google Scholar

Lakshmi Pillai, Usha Chauhan

Computational Analysis Of Subcellular Localization

Of Hypothetical Proteins Of Mycobacterium

Tuberculosis H37ra Strain

Journal of Advanced Bioinformatics Applications and Research

Vol 3, Issue 1, 2012, pp 246-249

2012

Google Scholar

Lakshmi Pillai  Usha Chauhan

Prediction Of Subcellular Localization And Function Of Hypothetical Proteins Of Mycobacterium Tuberculosis H37ra Strain

International Journal of Pharma and Bio Sciences

2012 July; 3(3): (B) 856 - 862

2012

Google Scholar

0.47

Lakshmi Pillai  Usha Chauhan

Comparative Analysis of Machine Learning Algorithms for Mycobacterium Tuberculosis Protein Sequences on the basis of Physicochemical Parameters

Journal of Medical Imaging and Health Informatics

Volume 4, Number 2, April 2014 , pp. 212-219(8)

2014

Google Scholar

sciE

0.642

Ashok Kumar Dwivedi, Usha Chouhan

Simulated Annealing Model For Reticulate Evolution In Molecular Sequences

International Journal of Pharma and Bio Sciences

Vol 4(4): (B) 497 – 503 2013 Oct

2013

SCOPUS

0.47

Ashok Kumar Dwivedi, Usha Chouhan

Genetic Algorithm Based Model For Reticulate Evolution In Molecular Sequences

International Journal of EmergingTechnologies in Computational and Applied Sciences

IjetcasVol 13-310;  2013

2013

Google Scholar

6.20

Ashok Kumar Dwivedi, Usha Chouhan

Monte Carlo With Simulated Annealing Model For Constructing Phylogenetic Network From Nucleotide Sequences

Online Journal of Bioinformatics

Volume 14(2):197-206, 2013

2013

Google Scholar

7.40

Ashok Kumar Dwivedi, Usha Chouhan

On Support Vector Machine Ensembles for Classification of Recombination Breakpoint Regions in Saccharomyces Cerevisiae

International Journal of Computer Applications

Volume 108 – No. 13, December 2014

2014

Google Scholar

Priyanka Rajput and Dr. Usha Chouhan

Mining quantitative association in peptide Sequences of Flavivirus Subfamilies

IOSR Journal of Pharmacy and Biological Sciences (IOSR-JPBS)

Vol 9(2) Ver. II  122-132(Mar-Apr. 2014),

2014

Google Scholar

Priyanka Rajput and Dr. Usha Chouhan

Mining quantitative associ- ations in peptide sequences of mosquito borne flavivirus

Online Journal of Bioinformatics

Volume 15 (1): 141-156, 2014

2014

Google Scholar

7.40

Ashok Kumar Dwivedi, Dr. Usha Chouhan

Comparative Study of Machine Learning Techniques for Genome Scale Discrimination of Recombinant HIV-1 Strains

Journal of Medical Imaging and Health Informatics

2014, Accepted

2014

SCIE

sciE

0.642

Neha Verma, Dr.  Usha Chouhan

Type 2 diabetes, Therapeutic Targets and Potential Drugs : A Review

IJETCAS

2015, 15-231

2015

Google Scholar

6.20

Neha Verma, Dr.  Usha Chouhan

Computational Techniques in Chemoinformatics : A Review

International Journal of Computational Biology and Bioinformatics

2015, Vol. 1: Issue 1, 17-21

2015

Google scholar

SowmyaDhawan , Usha Chouhan

Structural and Functional Characterization of Hericiumerinaceum, Manganese Peroxidase as an Antioxidant against Iron Induced Parkinson’s Disease

International Journal of Science and Research (IJSR)

Volume 4 Issue 8, August 2015

2015

Indian citation index

4.438

Mona Dwivedi , Usha Chouhan

Finite Element Model to Study the Thermal Effect of Tumor in Human Head

IOSR Journal of Mathematics (IOSR-JM)

Vol 11(4) PP 43-50 (Jul - Aug. 2015),

2015

Google scholar

SowmyaDhawan , Usha Chouhan

Phylogenetic and in silico structural and functional analysis of RIP’s as immunolesioning agents.

IOSR journal

Accepted

Google scholar

Afzal Hussain , Usha Chouhan and Chandan Kumar Verma

Identification of novel inhibi-tors against CyclinDepende-nt Kinase 9/Cyclin T1 complex as Anti cancer agent

Saudi Journal of Biological Sciences

Accepted

SCIE

1.257

NishaSinghal, Usha Chouhan

An Application of Generalized Fuzzy Soft Sets in a Social Decision Making Problem

International journal of Computer, Electrical, Automation, Control and Information Engineering (WASET)

Vol: 9(3) : 872-876, 2015

2015

Google Scholar

Manish Kumar Sinha, Usha Chouhan

In Silico Phylogenetic Analy-sis and Estimation of Diverg-ence Time for Ebola Virus using Bayesian Inference

International Journal of Latest Trends in Engineering and Technology (IJLTET)

Vol. 5 Issue 4 July 2015

2015

Indian  citation index

Ritu,  Usha Chouhan

Computational Approaches to Study Dissolution Kinetics

and their Profiles Similitude of Quetiapine Fumarate

International Journal of Pharma and Bio Sciences

Vol.  6(4): (B) 94 – 100, 2015 Oct

2015

SCOPUS

5.121

Monica Sharma,  Usha Chouhan

Model Dependant and Statist-ical Approaches to Study Release Kinetics of Meloxi-cam Release Matrix Tablets

International Journal of Pharma and Bio Sciences

Vol.  6(4): (B) 258 – 264, 2015 Oct

2015

Scopus , Google scholar

5.121

SumedhJunghare,  Usha Chouhan

Genetic Programming Appro-ach for the Modelling of Asp-irin Extended Release Tablets

International Journal for Scientific Research & Development

Vol. 3, Issue 06, 2015

2015

Google scholar

Ashok Kumar Dwivedi, Dr. Usha Chouhan

Comparative Study of Artificial Neural Network for Classification of Hot and Cold Recombination Regions in Sacharomices cerevisiae

Neural Computing and Applications

Vol 27, Issue 06,  2016

2016

SCIE/ scopus

SCIE 1.492

Ashok Kumar Dwivedi, Dr. Usha Chouhan

Genome scale classification of recombinant and non-recombinant HIV-1 sequences using artificial neural network ensembles

Current Science

VOL. 111(5), 853-860, 10 SEPTEMBER 2016

2016

SCIE/ scopus

SCI/ SCIE 0.926

Sunil Kumar Suryawanshi, Usha Chouhan

Application of Bioinformatics in the Prediction and Identification of Potential Antimicrobial Peptides from Curcuma longa

Biosciences Biotechnology Research Communications

Vol 9(2) : 216-224, 2016

2016

SCIE

ESCI

Neha Verma, Dr.  Usha Chouhan

Chemometric Modelling of PPAR-α and PPAR-γ dual Agonists for the treatment of Type-2 Diabetes

Current Science

Vol. 111(2), 356-367, 25 JULY 2016

2016

SCIE/ scopus

SCI/ SCIE 0.926

Ankita Srivastava and Usha Chouhan

In Silico prediction of 3D structure of RNA polymerase of

H1N1 influenza virus and design its optimal inhibitors

International Journal of Advanced Biotechnology and Research (IJBR)

Vol-7, Issue-3, 2016, pp1054-1061

2016

Web of Science

ESCI

2.41

Rahul Nikum, Usha Chouhan

Suffix Graph- An efficient approach for Network Motif Mining

Journal of Data Mining in Genomics and Proteomics

Vol-7,

Issue -3

June 2016

2016

Web of Science

BiswadipBandyopadhyay, Neha Verma and Usha Chouhan

In Sillico Analysis of Newly Identified Potential Drug Lead Compound against

VP40 for the Treatment of Ebola Virus Infection

International Journal of Advanced Biotechnology and Research (IJBR)

Vol-7, Issue-4, 2016, pp1357-1365

2016

Web of Science

ESCI

2.41

SowmyaDhawan and Usha Chouhan

Computational analysis of polymorphisms of ubiquitin

carboxyl–terminal esterase L1 (UCHL1) gene involved

in Parkinson’s disease

Biosciences Biotechnology Research Communications

Vol 9(3): pp: 503-511 (2016)

2016

Web of science

ESCI

Mona Dwivedi , Usha Chouhan

Analyzing Effect of Temperature Variation on Skin Sub-Layers Using Finite Element Approach

International Journal of Pharma and Bio Sciences

Vol.  8(1): (B) 675-682, 2017 Jan.

2017

SCOPUS

5.121

SwetaKumari, Usha Chouhan and Sunil Kumar Suryawanshi

Machine learning approaches to study HIV/AIDS

infection: A Review

Machine learning approaches to study HIV/AIDS infection: A Review

Biosciences Biotechnology Research Communications

Vol 9(3): pp: 503-511 (2017)

2017

Web of science

ESCI

DIKSHA PANDEY, USHA CHOUHAN and NEHA VERMA

HIV Infection: A Review of their Inhibitors Progression

Biomedical & Pharmacology Journal

Vol. 10(2), 749-758 (2017)

2017

Scopus

DIKSHA PANDEY, USHA CHOUHAN and NEHA VERMA

Identification And Analysis Of Lead Compounds Against Hiv-1 Integrase Enzyme Using Admet Prediction And Docking Analysis

International journal of pharmaceutical science and research

Volume 8, Issue 10 (2017)

2017

ESCI

NishaSinghal, Usha Chouhan

Application of Similarity Measure of Fuzzy Soft Sets in Selection of Manufacturing Method

Materials Today: Proceedings

4 (2017) 1561–1569

2017

Scopus

NishaSinghal, Usha Chouhan

A Case Study on Medical Diagnosis using Intuitionistic Fuzzy Soft Sets

International Journal of Advanced Biotechnology and Research

Vol-8, Issue-4, 2017, pp479-485

2017

Web of science

ESCI

NishaSinghal, Usha Chouhan

Application of Similarity Measures of Fuzzy Soft Sets in Vender Selection Problem

Materials Today: Proceedings

Volume 5, Issue 2, Part 1, 2018, Pages 3987-3993

2018

Scopus

ShaliniKaushik, Ashok Kumar Dwivedi, Dr. Usha Chouhan

Study Of Protein Subcellular LocalizationPrediction: A Review

International Journal of Life Science And Pharma Research

VOL-7 ISSUE-3 (2017)

Pages L48-56

2017

Web of science

ESCI

Sunil Kumar Suryawanshi, Usha Chouhan

Computational Approaches For The Prediction Of Antimicrobial Potential Peptides From Ocimum Tenuiflorum

Asian journal of pharmaceutical and clinical research

Vol 11 Issue 1 January 2018

2018

Scopus

Sapana Singh Yadav, Usha Chouhan

In Silico Analysis Of Protein-Protein InteractionNetwork Of Hutchinson GilfordProgeria Syndrome

International Journal of Life Science And Pharma Research

VOL-8 ISSUE-1 (2018)

Pages L9-20

2018

Web of science

ESCI

Ashok Kumar Dwivedi, Dr. Usha Chouhan

Classification of Hot and Cold Recombination Regions in Saccharomyces cerevisiae: Comparative Analysis of Two Machine Learning Techniques

Proceedings of the National Academy of Sciences, India Section A: Physical Sciences

Vol 89, pp 249-256, year 2019

2019

SCIE

SCI

Neha Verma, Dr.  Usha Chouhan

In-silico Analysis of Phenyl Propanoic Acid Derivatives to Design Potent Peroxisome Proliferator-activated Receptor (PPAR)

Dual Agonists for Type 2 Diabetes mellitus Therapy

Oriental Journal of Chemistry

2018, Vol. 34, No.(3):

Pg. 1400-1410

2018

Scopus

Esci

Neha Verma, Dr.  Usha Chouhan

ADMET Prediction of Dual PPARα/γ Agonists for Identification of Potential Anti-diabetic Agents

Advances in Intelligent Systems and Computing, Springer

2018, volume 748

2018

Scopus

KomalPatil and Dr.  Usha Chouhan

Relevance Of Machine Learning Techniques and Various Protein Features in Protein Fold Classification: A Review

Current Bioinformatics

Accepted

SCIE

0.52

Neha Verma, Dr.  Usha Chouhan

Pharmacoinformatic Studies on 4-Thiazolyl-phenoxy Tail Containing Indanyl Acetic Acid Derivatives as PPAR-Pan Agonists as Potent Anti-Diabetic Agent

Indian Journal of Pharmaceutical Education and Research

Vol 53 Issue 3 [Suppl 2] Jul-Sep, 2019

2019

SCIE

0.42

Amangautam, Dr. Usha Chouhan

Bio-Inspired Approaches for classification of Benign and Malignant tumor of skin

International Journal of Bioinformatics Research and Applications

Accepted

Scopus

RachnaSoni, Dr. Usha Chouhan

An approach to study of two competitive prey one predator model with disease in predator

Ecological Environment and Conservation

Vol 11(2), pg. 231-237, year 2018

2018

Scopus

Nisha Singhal, Ajay Verma, Usha Chouhan

An application of similarity measure of fuzzy soft sets in verndor selection problem

Materials Today: Proceedings

Vol 5,

Issue 2,

Year 2018

2018

Scopus

1.46

Lakshmi Pillai, Usha Chouhan

COMPUTATIONAL ANALYSIS OF MOLECULAR SEQUENCES OF MYCOBACTERIUM TUBERCULOSIS AND LEPRAE ON THE BASIS OF PATHWAY ANALYSIS FOR DRUG TARGET IDENTIFICATION

European Journal of Biomedical

Vol 5,

Issue 5,

Year 2018

2018

Web of science

6.044

Rachna Soni, Usha Chouhan

A dynamic effect of infectious disease on prey predator system and harvesting policy

BIOSCIENCE BIOTECHNOLOGY RESEARCH COMMUNICATIONS

Vol 11,

Issue 2,

Year 2018

2018

Web of science

5.90

Sapana Singh Yadav, Usha Chouhan

Analysis of protein-protein interaction network of laminopathy based on topological properties

Biomedical and Pharmacology Journal

Vol 11,

Issue 2,

Year 2018

2018

Web of science

0.79

Ashok Kumar Dwivedi, Usha Chouhan

Multilayer perceptron and evolutionary radial basis function neural network models for discrimination of HIV-1 genomes

Current Science

Vol 115,

Issue 11,

Year 2018

2018

SCIE

1.102

Upasana Ray, Usha Chouhan, Neha Verma

Comparative study of machine learning approaches for classification and prediction of selective caspase-3 antagonist for Zika virus drugs

Neural Computing and Applications

Vol 32,

Issue 15,

Year 2020

2020

SCIE/SCOPUS

5.606

Aaishwarya S Bajaj, Usha Chouhan

A review of various machine learning techniques for brain tumor detection from MRI images

Current Medical Imaging

Vol 16,

Issue 8,

Year 2020

2020

SCIE/SCOPUS

1.24

Sonu Kurmi, Usha Chouhan

A multicompartment mathematical model to study the dynamic behaviour of COVID-19 using vaccination as control parameter

Nonlinear Dynamics

Vol 109,

Issue 3,

Year 2022

2022

SCIE/SCOPUS

5.741

Shivanshi Shukla, Usha Chouhan, Sunil Kumar Suryawanshi, Jyoti Kant Choudhari

A comparative study by using machine learning classifiers to enhance classification and prediction of heart failure disease

Sunil Kumar Suryawanshi, Usha Chouhan,  Jyoti Kant Choudhari

Insilco Anticancer Peptide Prediction from Curcuma longa

Molecular & Cellular Biomechanics

19 (4), 191-208

2022

SCIE/SCOPUS

Amrit Venkatesan, Usha Chouhan Sunil Kumar Suryawanshi, ,  Jyoti Kant Choudhari

An in silico approach for prediction of B cell and T cell epitope candidates against Chikungunya virus

Immunological Medicine

46 (1), 1-12

2023

SCIE/SCOPUS

Usha Chouhan,Umesh Gamad,  Jyoti Kant Choudhari

Metagenomic analysis of soybean endosphere microbiome to reveal signatures of microbes for health and disease

Journal of Genetic Engineering and Biotechnology

21 (1), 1-21

2023

SCIE/SCOPUS

Title

Year

Agency

Co-Investigator(if any)

Published/Granted